Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acrb/acrd/acrf family protein | DW150_09940 | Not Available | Positive | 2404068 - 2407127 | 113014.0 |
| tolc family protein | DW150_09945 | Not Available | Positive | 2407114 - 2408403 | 48445.7 |
| histidine kinase | DW150_09950 | Not Available | Positive | 2408544 - 2409572 | 39021.8 |
| dna-binding response regulator | DW150_09955 | Not Available | Positive | 2409565 - 2410338 | 29809.8 |
| hypothetical protein | DW150_09960 | Not Available | Negative | 2410367 - 2410639 | 10533.0 |
| hypothetical protein | DW150_09965 | Not Available | Negative | 2410783 - 2412018 | 47016.0 |
| beta-n-acetylglucosaminidase | DW150_09970 | Not Available | Negative | 2412011 - 2413630 | 62113.8 |
| arylsulfatase | DW150_09975 | Not Available | Negative | 2413634 - 2415160 | 57535.6 |
| duf4976 domain-containing protein | DW150_09980 | Not Available | Negative | 2415202 - 2416749 | 60131.3 |
| right-handed parallel beta-helix repeat-containing protein | DW150_09985 | Not Available | Negative | 2416898 - 2419012 | 78584.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

