Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metallophosphoesterase | DW150_09785 | Not Available | Positive | 2368189 - 2369019 | 31399.9 |
| acyltransferase | DW150_09790 | Not Available | Positive | 2369034 - 2370176 | 43884.0 |
| hypothetical protein | DW150_09795 | Not Available | Positive | 2370535 - 2372412 | 72879.9 |
| duf3244 domain-containing protein | DW150_09800 | Not Available | Positive | 2372595 - 2372963 | 13885.9 |
| hypothetical protein | DW150_09805 | Not Available | Positive | 2372975 - 2373547 | 22529.2 |
| hemolysin | DW150_09810 | Not Available | Positive | 2373577 - 2374437 | 32345.2 |
| hypothetical protein | DW150_09815 | Not Available | Positive | 2374450 - 2374728 | 10554.8 |
| abc transporter permease | DW150_09825 | Not Available | Negative | 2375798 - 2376988 | 44503.8 |
| abc transporter permease | DW150_09830 | Not Available | Negative | 2376972 - 2378144 | 43620.6 |
| biotin/lipoyl-binding protein | DW150_09835 | Not Available | Negative | 2378205 - 2379200 | 36927.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

