Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | DW150_09685 | Not Available | Negative | 2345663 - 2347321 | 64560.9 |
| hypothetical protein | DW150_09690 | Not Available | Positive | 2347543 - 2347722 | 7130.75 |
| port family protein | DW150_09695 | Not Available | Negative | 2347888 - 2348577 | 25264.2 |
| hypothetical protein | DW150_09700 | Not Available | Negative | 2348712 - 2350379 | 64171.6 |
| port family protein | DW150_09705 | Not Available | Negative | 2350422 - 2351009 | 21981.3 |
| hypothetical protein | DW150_09710 | Not Available | Positive | 2351062 - 2351253 | 6901.63 |
| glycoside hydrolase | DW150_09715 | Not Available | Negative | 2351216 - 2353195 | 75334.0 |
| dna mismatch repair protein muts | DW150_09720 | Not Available | Negative | 2353245 - 2355857 | 97841.4 |
| flavin reductase family protein | DW150_09725 | Not Available | Positive | 2355976 - 2356482 | 19410.2 |
| Trna-gln | Not Available | Not Available | Positive | 2356608 - 2356681 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

