Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyprenyl synthetase family protein | DW150_09635 | Not Available | Negative | 2335500 - 2336474 | 36271.4 |
| dna polymerase i | DW150_09640 | Not Available | Positive | 2336566 - 2339481 | 109265.0 |
| hypothetical protein | DW150_09645 | Not Available | Positive | 2339552 - 2339764 | 7974.86 |
| duf3836 domain-containing protein | DW150_09650 | Not Available | Positive | 2339791 - 2340177 | 15029.0 |
| redox-regulated atpase ychf | DW150_09655 | Not Available | Positive | 2340377 - 2341480 | 40801.9 |
| ketopantoate reductase family protein | DW150_09660 | Not Available | Positive | 2341608 - 2342519 | 33105.2 |
| prolipoprotein diacylglyceryl transferase | DW150_09665 | Not Available | Positive | 2342516 - 2343337 | 31477.1 |
| chloramphenicol acetyltransferase | DW150_09670 | Not Available | Positive | 2343338 - 2343994 | 25304.1 |
| porin family protein | DW150_09675 | Not Available | Negative | 2344230 - 2344928 | 25718.4 |
| hypothetical protein | DW150_09680 | Not Available | Negative | 2345237 - 2345485 | 9387.43 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

