Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4141 domain-containing protein | DW150_09430 | Not Available | Negative | 2291612 - 2291839 | 8340.22 |
| duf3876 domain-containing protein | DW150_09435 | Not Available | Negative | 2291866 - 2292234 | 13589.3 |
| trag family conjugative transposon atpase | DW150_09440 | Not Available | Negative | 2292248 - 2294752 | 95840.9 |
| duf4133 domain-containing protein | DW150_09445 | Not Available | Negative | 2294749 - 2295072 | 12193.6 |
| duf4134 domain-containing protein | DW150_09450 | Not Available | Negative | 2295081 - 2295380 | 10257.6 |
| hypothetical protein | DW150_09455 | Not Available | Negative | 2295531 - 2296229 | 25520.9 |
| duf3408 domain-containing protein | DW150_09460 | Not Available | Negative | 2296269 - 2296559 | 11321.8 |
| duf3408 domain-containing protein | DW150_09465 | Not Available | Negative | 2296543 - 2296977 | 16889.5 |
| para family protein | DW150_09470 | Not Available | Negative | 2296981 - 2297739 | 28365.5 |
| hypothetical protein | DW150_09475 | Not Available | Positive | 2298504 - 2298932 | 16665.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

