Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW150_09380 | Not Available | Positive | 2282746 - 2283090 | 13609.6 |
| duf3872 domain-containing protein | DW150_09385 | Not Available | Negative | 2283257 - 2283688 | 16509.4 |
| conjugal transfer protein | DW150_09390 | Not Available | Negative | 2283697 - 2284260 | 20686.0 |
| conjugative transposon protein tran | DW150_09395 | Not Available | Negative | 2284262 - 2285233 | 36745.2 |
| conjugative transposon protein tram | DW150_09400 | Not Available | Negative | 2285284 - 2286717 | 53342.1 |
| duf3989 domain-containing protein | DW150_09405 | Not Available | Negative | 2286701 - 2286976 | 10440.8 |
| conjugative transposon protein trak | DW150_09410 | Not Available | Negative | 2286973 - 2287596 | 23883.5 |
| conjugative transposon protein traj | DW150_09415 | Not Available | Negative | 2287620 - 2288723 | 40072.4 |
| conjugal transfer protein trai | DW150_09420 | Not Available | Negative | 2288727 - 2289263 | 20593.9 |
| group ii intron reverse transcriptase/maturase | DW150_09425 | Not Available | Negative | 2289256 - 2291061 | 70759.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

