Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW150_09330 | Not Available | Positive | 2276577 - 2277809 | 44121.1 |
| hypothetical protein | DW150_09335 | Not Available | Negative | 2278214 - 2278489 | 10071.0 |
| hypothetical protein | DW150_09340 | Not Available | Positive | 2279173 - 2279382 | 7577.87 |
| hypothetical protein | DW150_09345 | Not Available | Positive | 2279396 - 2279614 | 8802.6 |
| pcfk-like protein | DW150_09350 | Not Available | Positive | 2279635 - 2280051 | 16023.7 |
| pcfj-like protein | DW150_09355 | Not Available | Positive | 2280056 - 2281339 | 49944.5 |
| hypothetical protein | DW150_09360 | Not Available | Positive | 2281359 - 2281604 | 9515.21 |
| hypothetical protein | DW150_09365 | Not Available | Positive | 2281764 - 2281991 | 9053.01 |
| duf3873 domain-containing protein | DW150_09370 | Not Available | Positive | 2282025 - 2282243 | 8637.2 |
| hypothetical protein | DW150_09375 | Not Available | Positive | 2282243 - 2282551 | 11624.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

