Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-tyr | Not Available | Not Available | Positive | 2215292 - 2215374 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 2215406 - 2215481 | Not Available |
| pirin family protein | DW150_09060 | Not Available | Positive | 2216001 - 2216705 | 26361.2 |
| exodeoxyribonuclease iii | DW150_09075 | Not Available | Negative | 2218085 - 2218843 | 29738.2 |
| preprotein translocase subunit secg | DW150_09080 | Not Available | Negative | 2219004 - 2219369 | 12569.2 |
| tetratricopeptide repeat protein | DW150_09085 | Not Available | Negative | 2219375 - 2220127 | 29558.3 |
| hypothetical protein | DW150_09090 | Not Available | Negative | 2220144 - 2220671 | 19738.6 |
| sigma-54-dependent fis family transcriptional regulator | DW150_09095 | Not Available | Negative | 2220658 - 2221923 | 46877.1 |
| inositol-3-phosphate synthase | DW150_09100 | Not Available | Negative | 2222090 - 2223397 | 48823.8 |
| ribokinase | DW150_09105 | Not Available | Positive | 2223533 - 2224429 | 33170.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

