Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna helicase recq | DW150_08950 | Not Available | Negative | 2198039 - 2200456 | 91666.0 |
| Trna-thr | Not Available | Not Available | Positive | 2200567 - 2200640 | Not Available |
| hypothetical protein | DW150_08960 | Not Available | Positive | 2200645 - 2200893 | 9849.11 |
| duf4199 domain-containing protein | DW150_08965 | Not Available | Positive | 2200900 - 2201433 | 20479.6 |
| glycosyltransferase | DW150_08970 | Not Available | Positive | 2201437 - 2202390 | 36365.1 |
| hypothetical protein | DW150_08975 | Not Available | Positive | 2202392 - 2202940 | 20757.9 |
| hypothetical protein | DW150_08980 | Not Available | Positive | 2202888 - 2203589 | 26615.0 |
| manganese efflux pump | DW150_08985 | Not Available | Positive | 2203593 - 2204165 | 21190.7 |
| fad:protein fmn transferase | DW150_08990 | Not Available | Positive | 2204179 - 2205195 | 37797.4 |
| marc family protein | DW150_08995 | Not Available | Negative | 2205354 - 2205956 | 22154.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

