Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW150_08900 | Not Available | Positive | 2178456 - 2178884 | 16940.2 |
| alpha-rhamnosidase | DW150_08905 | Not Available | Negative | 2179046 - 2181190 | 82024.8 |
| right-handed parallel beta-helix repeat-containing protein | DW150_08910 | Not Available | Negative | 2181205 - 2183028 | 68576.0 |
| glycoside hydrolase family 127 protein | DW150_08915 | Not Available | Negative | 2183053 - 2185158 | 78746.8 |
| alpha-rhamnosidase | DW150_08920 | Not Available | Negative | 2185385 - 2189359 | 149779.0 |
| duf4038 domain-containing protein | DW150_08925 | Not Available | Negative | 2189365 - 2190834 | 56369.4 |
| glycoside hydrolase family 88 protein | DW150_08930 | Not Available | Negative | 2190987 - 2192183 | 45210.8 |
| glycoside hydrolase family 95 protein | DW150_08935 | Not Available | Negative | 2192232 - 2194676 | 92010.8 |
| enolase | DW150_08940 | Not Available | Positive | 2194842 - 2196137 | 46741.8 |
| aaa family atpase | DW150_08945 | Not Available | Negative | 2196242 - 2197810 | 60578.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

