Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative colanic acid biosynthesis acetyltransferase | DW150_08850 | Not Available | Positive | 2168688 - 2169236 | 20670.2 |
| acyltransferase | DW150_08855 | Not Available | Positive | 2169257 - 2170216 | 37371.0 |
| glycosyltransferase family 2 protein | DW150_08860 | Not Available | Positive | 2170228 - 2171133 | 35756.9 |
| glycosyltransferase | DW150_08865 | Not Available | Positive | 2171162 - 2171980 | 30928.0 |
| hypothetical protein | DW150_08870 | Not Available | Positive | 2171977 - 2172705 | 27244.0 |
| hypothetical protein | DW150_08875 | Not Available | Positive | 2172710 - 2173927 | 45981.2 |
| carboxypeptidase regulatory-like domain-containing protein | DW150_08880 | Not Available | Positive | 2173955 - 2175184 | 43867.2 |
| gdp-mannose 4,6-dehydratase | DW150_08885 | Not Available | Positive | 2175212 - 2176291 | 40983.1 |
| gdp-l-fucose synthase | DW150_08890 | Not Available | Positive | 2176312 - 2177394 | 41079.2 |
| mannose-1-phosphate guanylyltransferase | DW150_08895 | Not Available | Positive | 2177409 - 2178452 | 39429.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

