Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitroreductase family protein | DW150_08600 | Not Available | Positive | 2097574 - 2098203 | 23036.8 |
| ytxh domain-containing protein | DW150_08605 | Not Available | Negative | 2098291 - 2098539 | 9307.09 |
| flavodoxin family protein | DW150_08610 | Not Available | Positive | 2098746 - 2099132 | 14613.5 |
| site-specific integrase | DW150_08615 | Not Available | Negative | 2099427 - 2100488 | 41095.9 |
| Trna-lys | Not Available | Not Available | Positive | 2100759 - 2100831 | Not Available |
| linear amide c-n hydrolase | DW150_08625 | Not Available | Negative | 2101003 - 2102082 | 39654.5 |
| hypothetical protein | DW150_08630 | Not Available | Negative | 2102296 - 2104527 | 85904.9 |
| sialate o-acetylesterase | DW150_08635 | Not Available | Negative | 2104540 - 2105964 | 53404.0 |
| dna-binding protein | DW150_08640 | Not Available | Negative | 2105982 - 2109212 | 121374.0 |
| glycoside hydrolase family 2 | DW150_08645 | Not Available | Negative | 2109360 - 2112200 | 106199.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

