Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii pantothenate kinase | DW150_08450 | Not Available | Positive | 2065807 - 2066535 | 26911.9 |
| hypothetical protein | DW150_08455 | Not Available | Positive | 2066522 - 2067838 | 49269.2 |
| hypothetical protein | DW150_08460 | Not Available | Positive | 2067886 - 2069241 | 50328.8 |
| lps export abc transporter periplasmic protein lptc | DW150_08465 | Not Available | Positive | 2069244 - 2069888 | 24876.2 |
| hlyc/corc family transporter | DW150_08470 | Not Available | Positive | 2069902 - 2071161 | 47603.0 |
| peptidylprolyl isomerase | DW150_08475 | Not Available | Positive | 2071267 - 2073399 | 78820.5 |
| hypothetical protein | DW150_08480 | Not Available | Positive | 2073551 - 2073958 | 15424.1 |
| lapa family protein | DW150_08485 | Not Available | Positive | 2074114 - 2074557 | 17118.8 |
| sodium ion-translocating decarboxylase subunit beta | DW150_08490 | Not Available | Positive | 2074579 - 2075793 | 43356.1 |
| energy transducer tonb | DW150_08495 | Not Available | Negative | 2075887 - 2076972 | 42027.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

