Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW150_08250 | Not Available | Positive | 2023968 - 2024918 | 36271.4 |
| hypothetical protein | DW150_08255 | Not Available | Positive | 2024943 - 2025896 | 36027.2 |
| hypothetical protein | DW150_08260 | Not Available | Positive | 2025933 - 2027072 | 42297.4 |
| hypothetical protein | DW150_08265 | Not Available | Positive | 2027074 - 2028300 | 47365.6 |
| hypothetical protein | DW150_08270 | Not Available | Positive | 2028307 - 2029176 | 32970.1 |
| dna topoisomerase iii | DW150_08275 | Not Available | Positive | 2029221 - 2029334 | 4037.12 |
| type ia dna topoisomerase | DW150_08280 | Not Available | Positive | 2029377 - 2031320 | 72602.2 |
| deaminase | DW150_08285 | Not Available | Negative | 2031243 - 2031656 | 15587.8 |
| dna-binding protein | DW150_08290 | Not Available | Positive | 2032265 - 2032414 | 5688.03 |
| dna-binding protein | DW150_08295 | Not Available | Positive | 2032414 - 2032716 | 11516.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

