Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trag | DW150_08200 | Not Available | Positive | 2014882 - 2016306 | 53758.3 |
| dna adenine methylase | DW150_08205 | Not Available | Positive | 2016375 - 2016542 | 6133.65 |
| dam family site-specific dna-(adenine-n6)-methyltransferase | DW150_08210 | Not Available | Positive | 2016573 - 2017115 | 20616.3 |
| hypothetical protein | DW150_08215 | Not Available | Negative | 2017436 - 2018101 | 24731.6 |
| hypothetical protein | DW150_08220 | Not Available | Negative | 2018400 - 2018687 | 10369.9 |
| hypothetical protein | DW150_08225 | Not Available | Negative | 2018657 - 2019397 | 26903.2 |
| m23 family peptidase | DW150_08230 | Not Available | Negative | 2019589 - 2019927 | 12410.1 |
| duf4099 domain-containing protein | DW150_08235 | Not Available | Positive | 2020248 - 2021327 | 41312.5 |
| hypothetical protein | DW150_08240 | Not Available | Positive | 2021334 - 2022512 | 45298.2 |
| hypothetical protein | DW150_08245 | Not Available | Positive | 2022517 - 2023965 | 55182.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

