Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW150_08150 | Not Available | Positive | 2000704 - 2005407 | 180785.0 |
| duf4157 domain-containing protein | DW150_08155 | Not Available | Positive | 2005475 - 2006068 | 22053.5 |
| atp-binding protein | DW150_08160 | Not Available | Positive | 2006090 - 2007382 | 48952.7 |
| response regulator | DW150_08165 | Not Available | Positive | 2007389 - 2009773 | 90877.0 |
| sigma-54-dependent fis family transcriptional regulator | DW150_08170 | Not Available | Positive | 2009770 - 2011056 | 48593.4 |
| hypothetical protein | DW150_08175 | Not Available | Positive | 2011262 - 2011591 | 11881.9 |
| hypothetical protein | DW150_08180 | Not Available | Positive | 2011820 - 2012449 | 23631.6 |
| hypothetical protein | DW150_08185 | Not Available | Positive | 2012777 - 2013025 | 9703.86 |
| mobilization protein | DW150_08190 | Not Available | Positive | 2013010 - 2014239 | 46357.8 |
| hypothetical protein | DW150_08195 | Not Available | Positive | 2014297 - 2014872 | 22034.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

