Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion protein | DW150_08100 | Not Available | Positive | 1989494 - 1989796 | 9765.25 |
| hypothetical protein | DW150_08105 | Not Available | Positive | 1989801 - 1990220 | 16274.5 |
| hypothetical protein | DW150_08110 | Not Available | Positive | 1990275 - 1991465 | 42278.4 |
| hypothetical protein | DW150_08115 | Not Available | Positive | 1991483 - 1992010 | 18357.4 |
| dna-binding protein | DW150_08120 | Not Available | Positive | 1992147 - 1992611 | 17095.2 |
| hypothetical protein | DW150_08125 | Not Available | Positive | 1992700 - 1993401 | 27572.8 |
| kila-n domain-containing protein | DW150_08130 | Not Available | Positive | 1993711 - 1994517 | 30761.0 |
| hypothetical protein | DW150_08135 | Not Available | Positive | 1994639 - 1997725 | 115349.0 |
| hypothetical protein | DW150_08140 | Not Available | Positive | 1997730 - 1998416 | 26308.1 |
| hypothetical protein | DW150_08145 | Not Available | Positive | 1998453 - 2000717 | 88098.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

