Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrillin family protein | DW150_08050 | Not Available | Positive | 1980734 - 1981702 | 34963.8 |
| hypothetical protein | DW150_08055 | Not Available | Positive | 1981819 - 1982835 | 37781.8 |
| duf4255 domain-containing protein | DW150_08060 | Not Available | Positive | 1982873 - 1983406 | 19709.9 |
| hypothetical protein | DW150_08065 | Not Available | Positive | 1983425 - 1984198 | 29335.3 |
| phage tail sheath family protein | DW150_08070 | Not Available | Positive | 1984245 - 1985786 | 56760.6 |
| phage tail protein | DW150_08075 | Not Available | Positive | 1985844 - 1986305 | 16842.0 |
| hypothetical protein | DW150_08080 | Not Available | Positive | 1986318 - 1986803 | 17903.6 |
| hypothetical protein | DW150_08085 | Not Available | Positive | 1986811 - 1986993 | 7238.75 |
| hypothetical protein | DW150_08090 | Not Available | Positive | 1987002 - 1987664 | 25066.9 |
| type vi secretion system tip protein vgrg | DW150_08095 | Not Available | Positive | 1987666 - 1989441 | 64231.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

