Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidoligase enzyme | DW150_07985 | Not Available | Negative | 1972023 - 1972952 | 35523.5 |
| para family protein | DW150_07990 | Not Available | Negative | 1973099 - 1973887 | 29882.4 |
| duf3408 domain-containing protein | DW150_07995 | Not Available | Negative | 1973982 - 1974368 | 14097.2 |
| duf3408 domain-containing protein | DW150_08000 | Not Available | Negative | 1974398 - 1974814 | 15459.6 |
| hypothetical protein | DW150_08020 | Not Available | Negative | 1975490 - 1975804 | 12064.8 |
| luxr family transcriptional regulator | DW150_08025 | Not Available | Negative | 1976000 - 1977013 | 38477.7 |
| hypothetical protein | DW150_08030 | Not Available | Positive | 1977138 - 1977581 | 16746.1 |
| duf3575 domain-containing protein | DW150_08035 | Not Available | Positive | 1977594 - 1978787 | 44533.1 |
| hypothetical protein | DW150_08040 | Not Available | Positive | 1978821 - 1979675 | 30357.9 |
| fimbrillin family protein | DW150_08045 | Not Available | Positive | 1979757 - 1980686 | 33708.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

