Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysozyme | DW150_07880 | Not Available | Negative | 1958778 - 1959266 | 18882.1 |
| hypothetical protein | DW150_07885 | Not Available | Negative | 1959335 - 1959805 | 18490.2 |
| hypothetical protein | DW150_07890 | Not Available | Negative | 1959810 - 1960274 | 18243.7 |
| hypothetical protein | DW150_07895 | Not Available | Negative | 1960278 - 1960748 | 18677.4 |
| duf3872 domain-containing protein | DW150_07900 | Not Available | Negative | 1960764 - 1961237 | 17723.9 |
| conjugal transfer protein | DW150_07905 | Not Available | Negative | 1961258 - 1961842 | 22120.7 |
| conjugative transposon protein tran | DW150_07910 | Not Available | Negative | 1961847 - 1962740 | 33249.1 |
| hypothetical protein | DW150_07920 | Not Available | Negative | 1963872 - 1964075 | 7479.1 |
| hypothetical protein | DW150_07925 | Not Available | Negative | 1964056 - 1964352 | 10885.4 |
| conjugative transposon protein trak | DW150_07930 | Not Available | Negative | 1964394 - 1965017 | 24269.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

