Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uridine kinase | DW150_07825 | Not Available | Negative | 1949224 - 1949835 | 23262.3 |
| dabb family protein | DW150_07830 | Not Available | Positive | 1949941 - 1950240 | 11148.5 |
| paai family thioesterase | DW150_07835 | Not Available | Positive | 1950251 - 1950742 | 18768.7 |
| atp phosphoribosyltransferase | DW150_07840 | Not Available | Positive | 1950972 - 1951823 | 31336.4 |
| histidinol dehydrogenase | DW150_07845 | Not Available | Positive | 1951873 - 1953153 | 46626.3 |
| histidinol-phosphate transaminase | DW150_07850 | Not Available | Positive | 1953156 - 1954196 | 39596.4 |
| bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase hisb | DW150_07855 | Not Available | Positive | 1954200 - 1955318 | 42207.7 |
| dna-binding protein | DW150_07860 | Not Available | Positive | 1956069 - 1956431 | 14200.3 |
| hypothetical protein | DW150_07865 | Not Available | Positive | 1956415 - 1956789 | 14417.8 |
| toxin bro | DW150_07875 | Not Available | Positive | 1957884 - 1958660 | 29749.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

