Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transketolase | DW150_07620 | Not Available | Negative | 1904097 - 1906109 | 72422.4 |
| atpase | DW150_07625 | Not Available | Negative | 1906244 - 1907842 | 57761.0 |
| l-arabinose isomerase | DW150_07630 | Not Available | Negative | 1907945 - 1909474 | 57229.3 |
| l-ribulose-5-phosphate 4-epimerase | DW150_07635 | Not Available | Negative | 1909514 - 1910200 | 24994.8 |
| nudix hydrolase | DW150_07640 | Not Available | Negative | 1910271 - 1910948 | 26233.5 |
| sss family transporter | DW150_07645 | Not Available | Negative | 1911024 - 1912766 | 64455.8 |
| galactose mutarotase | DW150_07650 | Not Available | Negative | 1912793 - 1913947 | 41945.7 |
| galactokinase | DW150_07655 | Not Available | Negative | 1914144 - 1915298 | 43010.0 |
| mfs transporter | DW150_07660 | Not Available | Negative | 1915339 - 1916679 | 47498.5 |
| galactose mutarotase | DW150_07665 | Not Available | Negative | 1916726 - 1917820 | 39973.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

