Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW150_07570 | Not Available | Negative | 1896746 - 1898857 | 80816.3 |
| hypothetical protein | DW150_07575 | Not Available | Positive | 1898769 - 1898957 | 7558.39 |
| 2-oxoglutarate ferredoxin oxidoreductase subunit gamma | DW150_07580 | Not Available | Negative | 1898951 - 1899493 | 19888.6 |
| 2-oxoglutarate oxidoreductase | DW150_07585 | Not Available | Negative | 1899507 - 1900271 | 27928.9 |
| hypothetical protein | DW150_07590 | Not Available | Negative | 1900290 - 1900457 | 6370.26 |
| 3-methyl-2-oxobutanoate dehydrogenase subunit vorb | DW150_07595 | Not Available | Negative | 1900464 - 1901546 | 39214.7 |
| 4fe-4s dicluster domain-containing protein | DW150_07600 | Not Available | Negative | 1901558 - 1901788 | 8117.04 |
| tetratricopeptide repeat protein | DW150_07605 | Not Available | Negative | 1901799 - 1902095 | 11531.6 |
| duf4468 domain-containing protein | DW150_07610 | Not Available | Negative | 1902462 - 1903559 | 40547.6 |
| ribose 5-phosphate isomerase b | DW150_07615 | Not Available | Negative | 1903666 - 1904100 | 15926.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

