Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | DW150_07415 | Not Available | Positive | 1857747 - 1858463 | 27647.6 |
| hypothetical protein | DW150_07420 | Not Available | Positive | 1858468 - 1859280 | 30822.4 |
| aaa family atpase | DW150_07425 | Not Available | Positive | 1859357 - 1860925 | 60572.2 |
| atp-dependent helicase | DW150_07430 | Not Available | Positive | 1861100 - 1863451 | 89241.3 |
| amidohydrolase | DW150_07435 | Not Available | Positive | 1863681 - 1864442 | 28483.7 |
| indolepyruvate ferredoxin oxidoreductase | DW150_07440 | Not Available | Positive | 1864466 - 1866082 | 58814.6 |
| indolepyruvate oxidoreductase subunit beta | DW150_07445 | Not Available | Positive | 1866079 - 1866660 | 21245.8 |
| pyridoxal phosphate-dependent aminotransferase | DW150_07450 | Not Available | Positive | 1866665 - 1867969 | 48702.3 |
| phenylacetate--coa ligase | DW150_07455 | Not Available | Positive | 1868064 - 1869365 | 48581.5 |
| amino acid-binding protein | DW150_07460 | Not Available | Positive | 1869379 - 1869795 | 15370.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

