Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW150_07365 | Not Available | Positive | 1849751 - 1850026 | 10400.9 |
| polysaccharide pyruvyl transferase family protein | DW150_07370 | Not Available | Positive | 1850270 - 1851361 | 42726.4 |
| glycosyltransferase | DW150_07375 | Not Available | Positive | 1851441 - 1852598 | 43936.0 |
| hypothetical protein | DW150_07380 | Not Available | Positive | 1852623 - 1853972 | 51007.4 |
| glycosyltransferase family 2 protein | DW150_07385 | Not Available | Positive | 1853980 - 1854939 | 36521.2 |
| acyltransferase | DW150_07390 | Not Available | Positive | 1854936 - 1855433 | 18064.3 |
| glycosyltransferase | DW150_07395 | Not Available | Positive | 1855472 - 1856581 | 42338.7 |
| dna polymerase subunit beta | DW150_07400 | Not Available | Positive | 1856681 - 1856974 | 11179.7 |
| duf86 domain-containing protein | DW150_07405 | Not Available | Positive | 1856967 - 1857350 | 14546.1 |
| hypothetical protein | DW150_07410 | Not Available | Negative | 1857378 - 1857692 | 12249.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

