Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s46 family peptidase | DW150_07210 | Not Available | Negative | 1811828 - 1814014 | 82665.6 |
| s46 family peptidase | DW150_07215 | Not Available | Negative | 1814014 - 1816179 | 81257.2 |
| duf4369 domain-containing protein | DW150_07220 | Not Available | Positive | 1816394 - 1817071 | 25343.6 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | DW150_07225 | Not Available | Negative | 1817085 - 1817843 | 28645.4 |
| metallophosphoesterase | DW150_07230 | Not Available | Negative | 1817883 - 1819043 | 43715.4 |
| 5-methyltetrahydrofolate--homocysteine methyltransferase | DW150_07235 | Not Available | Negative | 1819058 - 1819945 | 33419.9 |
| dihydroorotase | DW150_07240 | Not Available | Negative | 1819942 - 1821282 | 49602.5 |
| polyprenol monophosphomannose synthase | DW150_07245 | Not Available | Negative | 1821279 - 1822028 | 28446.6 |
| porin family protein | DW150_07250 | Not Available | Negative | 1822181 - 1822807 | 23463.7 |
| duf4136 domain-containing protein | DW150_07255 | Not Available | Negative | 1822849 - 1823487 | 24032.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

