Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome biogenesis gtpase der | DW150_07145 | Not Available | Negative | 1798784 - 1800097 | 49359.4 |
| gtpase era | DW150_07150 | Not Available | Negative | 1800131 - 1801012 | 33701.8 |
| ketoacyl-acp synthase iii | DW150_07155 | Not Available | Negative | 1801095 - 1802099 | 36848.4 |
| 50s ribosomal protein l32 | DW150_07160 | Not Available | Negative | 1802204 - 1802389 | 6838.3 |
| duf177 domain-containing protein | DW150_07165 | Not Available | Negative | 1802401 - 1802934 | 19865.5 |
| Trna-ala | Not Available | Not Available | Positive | 1806778 - 1806851 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 1806866 - 1806942 | Not Available |
| dna polymerase iii subunit gamma/tau | DW150_07195 | Not Available | Negative | 1809143 - 1810954 | 67581.0 |
| septum formation initiator family protein | DW150_07200 | Not Available | Positive | 1811073 - 1811369 | 11882.5 |
| hypothetical protein | DW150_07205 | Not Available | Positive | 1811393 - 1811710 | 12033.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

