Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenylyl-sulfate kinase | DW150_07035 | Not Available | Negative | 1772603 - 1773217 | 22686.7 |
| slc13/dass family transporter | DW150_07040 | Not Available | Negative | 1773247 - 1774800 | 56597.6 |
| 3'(2'),5'-bisphosphate nucleotidase | DW150_07045 | Not Available | Negative | 1774816 - 1775625 | 30420.2 |
| hypothetical protein | DW150_07050 | Not Available | Negative | 1775640 - 1776848 | 45885.1 |
| dna mismatch repair endonuclease mutl | DW150_07055 | Not Available | Negative | 1777077 - 1778945 | 68688.8 |
| hypothetical protein | DW150_07060 | Not Available | Negative | 1778967 - 1779263 | 11724.6 |
| hypothetical protein | DW150_07065 | Not Available | Negative | 1779266 - 1780933 | 63925.4 |
| peptidylprolyl isomerase | DW150_07070 | Not Available | Negative | 1780951 - 1782309 | 52289.8 |
| peptidyl-prolyl cis-trans isomerase | DW150_07075 | Not Available | Negative | 1782314 - 1783186 | 34132.6 |
| peptidylprolyl isomerase | DW150_07080 | Not Available | Negative | 1783223 - 1784560 | 52134.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

