Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophan--trna ligase | DW150_06985 | Not Available | Negative | 1757956 - 1759050 | 41376.8 |
| hypothetical protein | DW150_06990 | Not Available | Positive | 1759154 - 1759945 | 29912.6 |
| carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit | DW150_06995 | Not Available | Positive | 1760200 - 1763421 | 119478.0 |
| tonb-dependent receptor | DW150_07000 | Not Available | Negative | 1763487 - 1766291 | 106630.0 |
| tlpa family protein disulfide reductase | DW150_07005 | Not Available | Negative | 1766312 - 1766812 | 19152.4 |
| peroxide stress protein yaaa | DW150_07010 | Not Available | Positive | 1766900 - 1767667 | 29416.5 |
| hypothetical protein | DW150_07015 | Not Available | Positive | 1767775 - 1768974 | 43791.1 |
| sulfotransferase | DW150_07020 | Not Available | Negative | 1769052 - 1770158 | 43280.1 |
| sulfate adenylyltransferase subunit cysn | DW150_07025 | Not Available | Negative | 1770186 - 1771643 | 54617.7 |
| sulfate adenylyltransferase subunit cysd | DW150_07030 | Not Available | Negative | 1771680 - 1772591 | 35812.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

