Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1566 domain-containing protein | DW150_06925 | Not Available | Positive | 1747424 - 1748974 | 55029.7 |
| hypothetical protein | DW150_06930 | Not Available | Negative | 1748971 - 1749219 | 9093.19 |
| hypothetical protein | DW150_06940 | Not Available | Negative | 1749763 - 1749972 | 7878.6 |
| atp-dependent helicase | DW150_06945 | Not Available | Negative | 1749981 - 1751285 | 48264.5 |
| hypothetical protein | DW150_06955 | Not Available | Negative | 1751711 - 1752226 | 19789.6 |
| hypothetical protein | DW150_06960 | Not Available | Negative | 1752246 - 1754702 | 89557.4 |
| cysteine synthase a | DW150_06965 | Not Available | Positive | 1754926 - 1755876 | 33550.6 |
| trna 2-thiouridine(34) synthase mnma | DW150_06970 | Not Available | Positive | 1755883 - 1756947 | 39768.7 |
| dna-binding response regulator | DW150_06975 | Not Available | Negative | 1756944 - 1757594 | 24613.1 |
| Trna-val | Not Available | Not Available | Positive | 1757663 - 1757740 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

