Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-thr | Not Available | Not Available | Positive | 1690231 - 1690304 | Not Available |
| molecular chaperone groel | DW150_06725 | Not Available | Negative | 1690542 - 1692179 | 58147.1 |
| co-chaperone groes | DW150_06730 | Not Available | Negative | 1692221 - 1692493 | 9740.92 |
| 4fe-4s dicluster domain-containing protein | DW150_06735 | Not Available | Positive | 1692874 - 1694340 | 54204.3 |
| [fefe] hydrogenase h-cluster radical sam maturase hyde | DW150_06740 | Not Available | Positive | 1694349 - 1695386 | 39144.0 |
| [fefe] hydrogenase h-cluster radical sam maturase hydg | DW150_06745 | Not Available | Positive | 1695399 - 1696817 | 53331.0 |
| [fefe] hydrogenase h-cluster maturation gtpase hydf | DW150_06750 | Not Available | Positive | 1696881 - 1698071 | 43910.6 |
| histidine--trna ligase | DW150_06755 | Not Available | Negative | 1698652 - 1700016 | 50269.7 |
| sugar abc transporter substrate-binding protein | DW150_06760 | Not Available | Negative | 1700174 - 1701022 | 31302.2 |
| multidrug dmt transporter permease | DW150_06765 | Not Available | Negative | 1701030 - 1702046 | 36032.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

