Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW150_05805 | Not Available | + | 1471881 - 1472072 | 7513.54 |
| ragb/susd family nutrient uptake outer membrane protein | DW150_05810 | Not Available | - | 1472096 - 1473931 | 68567.4 |
| tonb-dependent receptor | DW150_05815 | Not Available | - | 1473960 - 1477181 | 116920.0 |
| xylanase | DW150_05820 | Not Available | + | 1477463 - 1478848 | 51035.4 |
| hybrid sensor histidine kinase/response regulator | DW150_05825 | Not Available | + | 1478984 - 1482916 | 149303.0 |
| rna-binding protein | DW150_05830 | Not Available | + | 1483182 - 1483427 | 9115.94 |
| threonine/serine exporter family protein | DW150_05835 | Not Available | - | 1483532 - 1484878 | 50203.2 |
| pasta domain-containing protein | DW150_05840 | Not Available | + | 1485028 - 1485669 | 23471.9 |
| rlua family pseudouridine synthase | DW150_05845 | Not Available | + | 1485688 - 1486761 | 40774.7 |
| d-alanine--d-alanine ligase | DW150_05850 | Not Available | + | 1486758 - 1487732 | 36067.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

