Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW150_05330 | Not Available | - | 1326766 - 1327674 | 34990.9 |
| endo-polygalacturonase | DW150_05335 | Not Available | - | 1327867 - 1329300 | 53702.4 |
| glycosyl hydrolase family 30 | DW150_05340 | Not Available | - | 1329297 - 1330724 | 54707.1 |
| alpha-l-arabinofuranosidase | DW150_05345 | Not Available | - | 1330752 - 1333235 | 93256.5 |
| alpha-galactosidase | DW150_05350 | Not Available | - | 1333471 - 1335681 | 83864.1 |
| hypothetical protein | DW150_05355 | Not Available | - | 1335765 - 1336826 | 40598.8 |
| ragb/susd family nutrient uptake outer membrane protein | DW150_05365 | Not Available | - | 1337979 - 1339919 | 71905.1 |
| helix-turn-helix domain-containing protein | DW150_05370 | Not Available | + | 1340449 - 1341384 | 36228.9 |
| site-specific integrase | DW150_05375 | Not Available | + | 1341526 - 1342644 | 43474.8 |
| transposase | DW150_05380 | Not Available | + | 1342892 - 1343749 | 33369.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

