Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Tannerellaceae |
| Genus | Parabacteroides |
| Species | Parabacteroides merdae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gastrointestinal tract; gut microbiomes |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Parabacteroides merdae strain AM14-15
Accession NumberQRKZ00000000.1
Gene Summary
Adenine Count
1422579 bp
Thymine Count
1386460 bp
Guanine Count
1143446 bp
Cytosine Count
1179903 bp
Genome Length
5132888 bp
Protein-coding Genes
4186 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW158_00005 | Not Available | - | 210 - 527 | 12107.4 |
| 5s ribosomal rna | Not Available | Not Available | + | 984 - 1094 | Not Available |
| hypothetical protein | DW158_00010 | Not Available | - | 803 - 2011 | 46441.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW158_00015 | Not Available | - | 2188 - 3696 | 56044.2 |
| tonb-dependent receptor | DW158_00020 | Not Available | - | 3720 - 6665 | 109254.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW158_00025 | Not Available | - | 7441 - 9231 | 68308.5 |
| susc/raga family tonb-linked outer membrane protein | DW158_00030 | Not Available | - | 9254 - 12703 | 128717.0 |
| duf4974 domain-containing protein | DW158_00035 | Not Available | - | 12821 - 13906 | 40999.3 |
| sigma-70 family rna polymerase sigma factor | DW158_00040 | Not Available | - | 13952 - 14509 | 22112.6 |
| hypothetical protein | DW158_00045 | Not Available | + | 14914 - 15264 | 13428.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
