Parabacteroides merdae strain AM14-15

Gram-negativeAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Tannerellaceae

Genus

Parabacteroides

Description

Parabacteroides merdae strain AM14-15 is a Gram-negative, anaerobic bacterium characterized by its inability to survive in the presence of oxygen. As a member of the genus Parabacteroides, this strain is likely to thrive in anaerobic environments, such as the gastrointestinal tracts of mammals, where it may play a role in the complex microbial community. The Gram-negative nature of Parabacteroides merdae strain AM14-15 suggests the presence of a thin peptidoglycan layer surrounded by an outer membrane, a feature that contributes to its resilience in anaerobic conditions. This structural characteristic may influence its interactions with other microorganisms and the host environment. Given the increasing interest in gut microbiota and its implications for health, understanding the specific traits of Parabacteroides merdae strain AM14-15 could provide insights into its potential functional roles within microbial consortia. The ecological niche occupied by this strain may contribute to metabolic processes, such as fermentation and the degradation of complex carbohydrates, which are vital for nutrient absorption in host organisms. Further research into this strain could elucidate its contributions to gut health and its potential applications in probiotic formulations, particularly in contexts where anaerobic bacteria play a crucial role in maintaining microbial balance.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyTannerellaceae
GenusParabacteroides
SpeciesParabacteroides merdae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgastrointestinal tract; gut microbiomes
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parabacteroides merdae strain AM14-15

Accession NumberQRKZ00000000.1

Gene Summary

Adenine Count

1422579 bp

Thymine Count

1386460 bp

Guanine Count

1143446 bp

Cytosine Count

1179903 bp

Genome Length

5132888 bp

Protein-coding Genes

4186 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinDW158_00005Not Available-210 - 52712107.4
5s ribosomal rnaNot AvailableNot Available+984 - 1094Not Available
hypothetical proteinDW158_00010Not Available-803 - 201146441.0
ragb/susd family nutrient uptake outer membrane proteinDW158_00015Not Available-2188 - 369656044.2
tonb-dependent receptorDW158_00020Not Available-3720 - 6665109254.0
ragb/susd family nutrient uptake outer membrane proteinDW158_00025Not Available-7441 - 923168308.5
susc/raga family tonb-linked outer membrane proteinDW158_00030Not Available-9254 - 12703128717.0
duf4974 domain-containing proteinDW158_00035Not Available-12821 - 1390640999.3
sigma-70 family rna polymerase sigma factorDW158_00040Not Available-13952 - 1450922112.6
hypothetical proteinDW158_00045Not Available+14914 - 1526413428.2

Displaying genes 1 – 10 of 4264 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites