Parabacteroides merdae strain AM14-15

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Tannerellaceae

Genus

Parabacteroides

Description

Parabacteroides merdae strain AM14-15 is a Gram-negative, rod-shaped bacterium that resides in the gastrointestinal tract, specifically within human gut microbiomes. This strain is classified as an anaerobe, indicating that it thrives in environments devoid of oxygen. Notably, Parabacteroides merdae possesses flagella, which may contribute to its mobility within the gut environment. The strain has a single replicon, suggesting a streamlined genomic organization, which could influence its adaptability and functional capabilities in the gut ecosystem. P. merdae is associated with Homo sapiens, highlighting its relevance to human health and the complexities of the gut microbiota. One important health effect attributed to this strain is its potential association with OSA (obstructive sleep apnea). This link underscores the intricate relationship between gut microbiota and various health conditions. The presence of specific microbial species like P. merdae could influence metabolic processes or inflammatory responses, which may be implicated in the pathophysiology of OSA. Overall, the study of Parabacteroides merdae strain AM14-15 contributes to our understanding of gut microbiomes and their impact on human health, particularly in relation to diseases such as OSA. Further research may elucidate the specific mechanisms through which this bacterium interacts with host physiology and its potential therapeutic implications.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyTannerellaceae
GenusParabacteroides
SpeciesParabacteroides merdae
Strainstrain AM14-15

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Parabacteroides merdae strain AM14-15
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgastrointestinal tract; gut microbiomes
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parabacteroides merdae strain AM14-15 AM14-15.Scaf135, whole

Gene Summary

Adenine Count

1422579 bp

Thymine Count

1386460 bp

Guanine Count

1143446 bp

Cytosine Count

1179903 bp

Genome Length

5132888 bp

Protein-coding Genes

4186 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDW158_00235Not AvailableNegative63614 - 6538667575.3
Ncrna_class:rnase_p_rnaNot AvailableNot AvailablePositive65428 - 65785Not Available
ragb/susd family nutrient uptake outer membrane proteinDW158_00240Not AvailableNegative65507 - 6722865233.7
susc/raga family tonb-linked outer membrane proteinDW158_00245Not AvailableNegative67243 - 70281113451.0
hypothetical proteinDW158_00250Not AvailableNegative70758 - 709407194.62
pirin family proteinDW158_00255Not AvailableNegative71482 - 7218926292.2
imp dehydrogenaseDW158_00260Not AvailablePositive72409 - 7390254604.8
nucleotide pyrophosphataseDW158_00265Not AvailableNegative73988 - 7493234995.9
hypothetical proteinDW158_00270Not AvailableNegative74929 - 7744294130.5
1,4-beta-xylanaseDW158_00275Not AvailableNegative78043 - 7898735705.9

Displaying genes 51 – 60 of 4264 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
OsaCausesPMC12415091

Displaying health effects 1 – 1 of 1 in total