Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Tannerellaceae |
| Genus | Parabacteroides |
| Species | Parabacteroides merdae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gastrointestinal tract; gut microbiomes |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Parabacteroides merdae strain AM14-15
Accession NumberQRKZ00000000.1
Gene Summary
Adenine Count
1422579 bp
Thymine Count
1386460 bp
Guanine Count
1143446 bp
Cytosine Count
1179903 bp
Genome Length
5132888 bp
Protein-coding Genes
4186 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| arabinan endo-1,5-alpha-l-arabinosidase | DW158_00280 | Not Available | - | 79055 - 80119 | 40766.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW158_00285 | Not Available | - | 80206 - 82047 | 70675.8 |
| fecr family protein | DW158_00295 | Not Available | - | 85847 - 86872 | 38648.6 |
| rna polymerase sigma-70 factor | DW158_00300 | Not Available | - | 86991 - 87575 | 22903.7 |
| thiol reductase thioredoxin | DW158_00305 | Not Available | + | 87728 - 88081 | 13636.7 |
| hypothetical protein | DW158_00310 | Not Available | - | 88134 - 91622 | 132426.0 |
| hypothetical protein | DW158_00315 | Not Available | - | 91652 - 92320 | 25900.0 |
| hypothetical protein | DW158_00320 | Not Available | + | 92418 - 92660 | 9336.54 |
| type ii toxin-antitoxin system rele/pare family toxin | DW158_00325 | Not Available | + | 92651 - 92965 | 12442.2 |
| phoh family protein | DW158_00330 | Not Available | + | 93089 - 94111 | 38134.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
