Parabacteroides merdae strain AM14-15

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Tannerellaceae

Genus

Parabacteroides

Description

Parabacteroides merdae strain AM14-15 is a Gram-negative, rod-shaped bacterium that resides in the gastrointestinal tract, specifically within human gut microbiomes. This strain is classified as an anaerobe, indicating that it thrives in environments devoid of oxygen. Notably, Parabacteroides merdae possesses flagella, which may contribute to its mobility within the gut environment. The strain has a single replicon, suggesting a streamlined genomic organization, which could influence its adaptability and functional capabilities in the gut ecosystem. P. merdae is associated with Homo sapiens, highlighting its relevance to human health and the complexities of the gut microbiota. One important health effect attributed to this strain is its potential association with OSA (obstructive sleep apnea). This link underscores the intricate relationship between gut microbiota and various health conditions. The presence of specific microbial species like P. merdae could influence metabolic processes or inflammatory responses, which may be implicated in the pathophysiology of OSA. Overall, the study of Parabacteroides merdae strain AM14-15 contributes to our understanding of gut microbiomes and their impact on human health, particularly in relation to diseases such as OSA. Further research may elucidate the specific mechanisms through which this bacterium interacts with host physiology and its potential therapeutic implications.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyTannerellaceae
GenusParabacteroides
SpeciesParabacteroides merdae
Strainstrain AM14-15

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Parabacteroides merdae strain AM14-15
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgastrointestinal tract; gut microbiomes
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parabacteroides merdae strain AM14-15 AM14-15.Scaf135, whole

Gene Summary

Adenine Count

1422579 bp

Thymine Count

1386460 bp

Guanine Count

1143446 bp

Cytosine Count

1179903 bp

Genome Length

5132888 bp

Protein-coding Genes

4186 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf4923 family proteinDW158_17655Not AvailableNegative4132425 - 413304522308.0
class ii fructose-1,6-bisphosphate aldolaseDW158_17660Not AvailableNegative4133142 - 413414036320.5
type b 50s ribosomal protein l31DW158_17665Not AvailablePositive4134370 - 41346249583.5
aminoglycoside phosphotransferase family proteinDW158_17670Not AvailablePositive4134843 - 413594042238.5
crp/fnr family transcriptional regulatorDW158_17675Not AvailablePositive4136066 - 413662921803.9
acyltransferaseDW158_17680Not AvailablePositive4136711 - 413787443163.7
undecaprenyl/decaprenyl-phosphate alpha-n-acetylglucosaminyl 1-phosphate transferaseDW158_17685Not AvailablePositive4138535 - 413967142134.2
udp-n-acetyl-d-mannosamine dehydrogenaseDW158_17690Not AvailablePositive4139686 - 414089445007.6
lipopolysaccharide biosynthesis proteinDW158_17695Not AvailablePositive4140905 - 414243457541.8
glycosyltransferase family 1 proteinDW158_17700Not AvailablePositive4142437 - 414341137664.1

Displaying genes 3391 – 3400 of 4264 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
OsaCausesPMC12415091

Displaying health effects 1 – 1 of 1 in total