Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain AM22-1
Accession NumberQRIN00000000.1
Gene Summary
Adenine Count
1032444 bp
Thymine Count
1038501 bp
Guanine Count
844315 bp
Cytosine Count
840116 bp
Genome Length
3756228 bp
Protein-coding Genes
3070 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| b-1,4-endoglucanase | DW250_00025 | Not Available | - | 4702 - 7059 | 88055.7 |
| t9ss c-terminal target domain-containing protein | DW250_00030 | Not Available | - | 7056 - 7511 | 16276.6 |
| polygalacturonase | DW250_00035 | Not Available | - | 7622 - 9637 | 71554.0 |
| hypothetical protein | DW250_00040 | Not Available | - | 9709 - 10983 | 47608.7 |
| ragb/susd family nutrient uptake outer membrane protein | DW250_00045 | Not Available | - | 11042 - 12838 | 67705.4 |
| tonb-dependent receptor | DW250_00050 | Not Available | - | 12864 - 16172 | 121280.0 |
| acetylxylan esterase | DW250_00055 | Not Available | + | 16944 - 18233 | 48330.2 |
| beta-mannosidase | DW250_00060 | Not Available | + | 18295 - 19401 | 41524.7 |
| glycosidase | DW250_00065 | Not Available | + | 19431 - 20603 | 44298.4 |
| 5s ribosomal rna | Not Available | Not Available | + | 19934 - 20046 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.