Segatella copri strain AM22-19

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Prevotellaceae

Genus

Segatella

Description

Segatella copri strain AM22-19 is a gram-negative, anaerobic bacterium predominantly found in the gut of Homo sapiens. This strain is characterized by its rod shape and possesses a single replicon, indicating a relatively simple genomic structure, which may facilitate its adaptation to the gut environment. As an anaerobe, Segatella copri strain AM22-19 thrives in oxygen-free conditions, making it well-suited for the human intestinal tract, where such environments prevail. The gut microbiome plays a critical role in human health, contributing to digestion, metabolism, and immune system regulation. The presence of Segatella copri may influence these processes, although specific interactions and effects within the microbiome remain to be fully elucidated. The accession number for this strain is QRIF00000000.1, which serves as a reference for genomic data and further studies. Understanding the role of Segatella copri strain AM22-19 in the gut could provide insights into its potential contributions to human health and disease, particularly considering the complex relationships among gut microbiota and their host. Further research may explore the specific functions and interactions of this strain within the microbial community, shedding light on its ecological significance and potential implications for gut health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPrevotellaceae
GenusSegatella
SpeciesSegatella copri
Strainstrain AM22-19

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Segatella copri strain AM22-19 AM22-19.Scaf197, whole genome

Gene Summary

Adenine Count

1026019 bp

Thymine Count

1032292 bp

Guanine Count

838853 bp

Cytosine Count

835331 bp

Genome Length

3733692 bp

Protein-coding Genes

3062 genes

Non-Coding Genes

80 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pyruvate:ferredoxin (flavodoxin) oxidoreductaseDW262_10715Not AvailablePositive2520633 - 2524211131758.0
glycoside hydrolaseDW262_10720Not AvailableNegative2525518 - 252739871537.5
duf4981 domain-containing proteinDW262_10725Not AvailableNegative2527404 - 2530559120307.0
lysine exporter lyso family proteinDW262_10730Not AvailableNegative2530593 - 253119521376.9
duf340 domain-containing proteinDW262_10735Not AvailableNegative2531192 - 253150310935.0
ragb/susd family nutrient uptake outer membrane proteinDW262_10740Not AvailableNegative2531649 - 253317258397.6
susc/raga family tonb-linked outer membrane proteinDW262_10745Not AvailableNegative2533197 - 2536544124151.0
pglz domain-containing proteinDW262_10750Not AvailablePositive2536737 - 253829060085.0
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsaeDW262_10755Not AvailablePositive2538345 - 253875515472.2
thioredoxinDW262_10760Not AvailableNegative2538970 - 253928411501.8

Displaying genes 2101 – 2110 of 3142 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.