Segatella copri strain AM22-19

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Prevotellaceae

Genus

Segatella

Description

Segatella copri strain AM22-19 is a gram-negative, anaerobic bacterium predominantly found in the gut of Homo sapiens. This strain is characterized by its rod shape and possesses a single replicon, indicating a relatively simple genomic structure, which may facilitate its adaptation to the gut environment. As an anaerobe, Segatella copri strain AM22-19 thrives in oxygen-free conditions, making it well-suited for the human intestinal tract, where such environments prevail. The gut microbiome plays a critical role in human health, contributing to digestion, metabolism, and immune system regulation. The presence of Segatella copri may influence these processes, although specific interactions and effects within the microbiome remain to be fully elucidated. The accession number for this strain is QRIF00000000.1, which serves as a reference for genomic data and further studies. Understanding the role of Segatella copri strain AM22-19 in the gut could provide insights into its potential contributions to human health and disease, particularly considering the complex relationships among gut microbiota and their host. Further research may explore the specific functions and interactions of this strain within the microbial community, shedding light on its ecological significance and potential implications for gut health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPrevotellaceae
GenusSegatella
SpeciesSegatella copri
Strainstrain AM22-19

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Segatella copri strain AM22-19 AM22-19.Scaf197, whole genome

Gene Summary

Adenine Count

1026019 bp

Thymine Count

1032292 bp

Guanine Count

838853 bp

Cytosine Count

835331 bp

Genome Length

3733692 bp

Protein-coding Genes

3062 genes

Non-Coding Genes

80 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sufe family proteinDW262_08135Not AvailableNegative1892396 - 189282716322.7
u32 family peptidaseDW262_08140Not AvailableNegative1892827 - 189409247220.6
hypothetical proteinDW262_08145Not AvailablePositive1894313 - 189526035256.9
hypothetical proteinDW262_08155Not AvailablePositive1897329 - 189797325351.2
rna polymerase sigma-54 factorDW262_08160Not AvailablePositive1897976 - 189949958258.6
phosphatase pap2 family proteinDW262_08165Not AvailablePositive1899582 - 190019022729.2
5-(carboxyamino)imidazole ribonucleotide mutaseDW262_08170Not AvailablePositive1900216 - 190072217460.6
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthaseDW262_08175Not AvailablePositive1900775 - 190264368472.1
dna-binding response regulatorDW262_08180Not AvailablePositive1902911 - 190361826404.9
hypothetical proteinDW262_08185Not AvailablePositive1903708 - 190452030850.9

Displaying genes 1601 – 1610 of 3142 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.