Segatella copri strain AM22-2

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Prevotellaceae

Genus

Segatella

Description

Segatella copri strain AM22-2 is a Gram-negative, anaerobic bacterium characterized by its rod shape. This strain is found in the gut of Homo sapiens, indicating its role in the human microbiome. The presence of a single replicon suggests a streamlined genetic architecture, which may contribute to its adaptability within the host environment. As an anaerobe, Segatella copri strain AM22-2 thrives in low-oxygen conditions typical of the gastrointestinal tract. This habitat is significant, as the gut microbiome is known to play a crucial role in human health, influencing digestion, metabolism, and immune responses. The specific interactions of Segatella copri with its host may shed light on its contributions to these processes, although the precise mechanisms remain to be fully understood. The accession number for this strain is QRIE00000000.1, which serves as a reference for researchers interested in exploring its genetic and functional characteristics further. Overall, Segatella copri strain AM22-2 exemplifies the diversity of microbial life within the human gut and underscores the importance of studying such organisms to better understand their ecological roles and potential impacts on human health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPrevotellaceae
GenusSegatella
SpeciesSegatella copri
Strainstrain AM22-2

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Segatella copri strain AM22-2 AM22-2.Scaf182, whole genome shotgun

Gene Summary

Adenine Count

1047872 bp

Thymine Count

1054399 bp

Guanine Count

860323 bp

Cytosine Count

851245 bp

Genome Length

3814772 bp

Protein-coding Genes

3136 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glucose-1-phosphate thymidylyltransferaseDW263_14895Not AvailablePositive3453725 - 345463333710.6
dtdp-4-dehydrorhamnose 3,5-epimeraseDW263_14900Not AvailablePositive3454640 - 345522722420.6
udp-glucose 6-dehydrogenaseDW263_14905Not AvailablePositive3455254 - 345663951907.8
glycosyl transferase family 2DW263_14910Not AvailablePositive3456830 - 345758228219.7
shikimate dehydrogenaseDW263_14915Not AvailablePositive3457601 - 345865039263.4
had family hydrolaseDW263_14920Not AvailablePositive3458650 - 345916518873.0
serine acetyltransferaseDW263_14925Not AvailablePositive3459182 - 345958914479.6
hypothetical proteinDW263_14930Not AvailablePositive3459596 - 346056738021.2
polysaccharide biosynthesis proteinDW263_14935Not AvailablePositive3460570 - 346182948124.5
duf4910 domain-containing proteinDW263_14940Not AvailablePositive3461839 - 346313449369.3

Displaying genes 2891 – 2900 of 3220 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.