Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | strain AM22-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047872 bp
Thymine Count
1054399 bp
Guanine Count
860323 bp
Cytosine Count
851245 bp
Genome Length
3814772 bp
Protein-coding Genes
3136 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-amlyase | DW263_12505 | Not Available | Positive | 2931567 - 2934277 | 99873.3 |
| acetyl xylan esterase | DW263_12510 | Not Available | Negative | 2934455 - 2936365 | 71635.0 |
| tonb-dependent receptor | DW263_12515 | Not Available | Positive | 2936739 - 2939825 | 112772.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW263_12520 | Not Available | Positive | 2939845 - 2941638 | 67492.4 |
| chromophore lyase | DW263_12525 | Not Available | Positive | 2941757 - 2944273 | 95351.8 |
| acetylxylan esterase | DW263_12530 | Not Available | Positive | 2944287 - 2944991 | 26542.6 |
| glycoside hydrolase | DW263_12535 | Not Available | Positive | 2945012 - 2946502 | 55287.4 |
| duf5110 domain-containing protein | DW263_12540 | Not Available | Positive | 2946569 - 2949106 | 96931.4 |
| glycoside hydrolase family 3 protein | DW263_12545 | Not Available | Positive | 2949221 - 2951827 | 97606.3 |
| tlpa family protein disulfide reductase | DW263_12550 | Not Available | Positive | 2951890 - 2954286 | 92394.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
