Segatella copri strain AM22-2

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Prevotellaceae

Genus

Segatella

Description

Segatella copri strain AM22-2 is a Gram-negative, anaerobic bacterium characterized by its rod shape. This strain is found in the gut of Homo sapiens, indicating its role in the human microbiome. The presence of a single replicon suggests a streamlined genetic architecture, which may contribute to its adaptability within the host environment. As an anaerobe, Segatella copri strain AM22-2 thrives in low-oxygen conditions typical of the gastrointestinal tract. This habitat is significant, as the gut microbiome is known to play a crucial role in human health, influencing digestion, metabolism, and immune responses. The specific interactions of Segatella copri with its host may shed light on its contributions to these processes, although the precise mechanisms remain to be fully understood. The accession number for this strain is QRIE00000000.1, which serves as a reference for researchers interested in exploring its genetic and functional characteristics further. Overall, Segatella copri strain AM22-2 exemplifies the diversity of microbial life within the human gut and underscores the importance of studying such organisms to better understand their ecological roles and potential impacts on human health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPrevotellaceae
GenusSegatella
SpeciesSegatella copri
Strainstrain AM22-2

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Segatella copri strain AM22-2 AM22-2.Scaf182, whole genome shotgun

Gene Summary

Adenine Count

1047872 bp

Thymine Count

1054399 bp

Guanine Count

860323 bp

Cytosine Count

851245 bp

Genome Length

3814772 bp

Protein-coding Genes

3136 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-binding proteinDW263_11785Not AvailableNegative2760542 - 276183749807.8
imelysinDW263_11790Not AvailableNegative2762178 - 276350648262.3
hypothetical proteinDW263_11795Not AvailableNegative2763573 - 276486848052.3
helix-turn-helix transcriptional regulatorDW263_11800Not AvailablePositive2765226 - 276618236632.8
dna-binding response regulatorDW263_11805Not AvailableNegative2766315 - 276692922954.1
cardiolipin synthaseDW263_11810Not AvailableNegative2766999 - 276826448827.1
kpsf/gutq family sugar-phosphate isomeraseDW263_11815Not AvailableNegative2768316 - 276929636004.0
3-deoxy-8-phosphooctulonate synthaseDW263_11820Not AvailableNegative2769490 - 277024227435.2
mechanosensitive ion channel family proteinDW263_11825Not AvailableNegative2770318 - 277267890414.8
atpaseDW263_11830Not AvailablePositive2772855 - 277380534887.2

Displaying genes 2301 – 2310 of 3220 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.