Segatella copri strain AM22-2

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Prevotellaceae

Genus

Segatella

Description

Segatella copri strain AM22-2 is a Gram-negative, anaerobic bacterium characterized by its rod shape. This strain is found in the gut of Homo sapiens, indicating its role in the human microbiome. The presence of a single replicon suggests a streamlined genetic architecture, which may contribute to its adaptability within the host environment. As an anaerobe, Segatella copri strain AM22-2 thrives in low-oxygen conditions typical of the gastrointestinal tract. This habitat is significant, as the gut microbiome is known to play a crucial role in human health, influencing digestion, metabolism, and immune responses. The specific interactions of Segatella copri with its host may shed light on its contributions to these processes, although the precise mechanisms remain to be fully understood. The accession number for this strain is QRIE00000000.1, which serves as a reference for researchers interested in exploring its genetic and functional characteristics further. Overall, Segatella copri strain AM22-2 exemplifies the diversity of microbial life within the human gut and underscores the importance of studying such organisms to better understand their ecological roles and potential impacts on human health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPrevotellaceae
GenusSegatella
SpeciesSegatella copri
Strainstrain AM22-2

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Segatella copri strain AM22-2 AM22-2.Scaf182, whole genome shotgun

Gene Summary

Adenine Count

1047872 bp

Thymine Count

1054399 bp

Guanine Count

860323 bp

Cytosine Count

851245 bp

Genome Length

3814772 bp

Protein-coding Genes

3136 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tetratricopeptide repeat proteinDW263_09715Not AvailableNegative2269072 - 226980928922.4
vwa domain-containing proteinDW263_09720Not AvailableNegative2269840 - 227087738173.1
vwa domain-containing proteinDW263_09725Not AvailableNegative2271025 - 227202337262.9
hypothetical proteinDW263_09730Not AvailableNegative2272110 - 227318640778.6
duf58 domain-containing proteinDW263_09735Not AvailableNegative2273300 - 227416933664.7
moxr family atpaseDW263_09740Not AvailableNegative2274210 - 227520536954.8
mfs transporterDW263_09745Not AvailableNegative2275394 - 227661446051.3
3-methyl-2-oxobutanoate hydroxymethyltransferaseDW263_09750Not AvailableNegative2276684 - 227750228915.0
had family phosphataseDW263_09755Not AvailableNegative2277540 - 227822325908.3
16s rrna (guanine(527)-n(7))-methyltransferase rsmgDW263_09760Not AvailablePositive2278274 - 227903529236.4

Displaying genes 1901 – 1910 of 3220 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.