Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | strain AM22-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047872 bp
Thymine Count
1054399 bp
Guanine Count
860323 bp
Cytosine Count
851245 bp
Genome Length
3814772 bp
Protein-coding Genes
3136 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | DW263_09460 | Not Available | Negative | 2189216 - 2189788 | 22394.1 |
| hypothetical protein | DW263_09465 | Not Available | Negative | 2189906 - 2190163 | 9789.7 |
| pectate lyase | DW263_09470 | Not Available | Negative | 2190201 - 2192882 | 100838.0 |
| polysaccharide lyase | DW263_09475 | Not Available | Negative | 2193002 - 2194750 | 64841.8 |
| helix-turn-helix domain-containing protein | DW263_09480 | Not Available | Positive | 2194970 - 2195470 | 18741.7 |
| hypothetical protein | DW263_09485 | Not Available | Positive | 2195534 - 2195737 | 7478.79 |
| ragb/susd family nutrient uptake outer membrane protein | DW263_09490 | Not Available | Negative | 2196179 - 2198245 | 77055.6 |
| tonb-dependent receptor | DW263_09495 | Not Available | Negative | 2198269 - 2201442 | 116786.0 |
| helix-turn-helix domain-containing protein | DW263_09500 | Not Available | Negative | 2201624 - 2204473 | 109519.0 |
| glycoside hydrolase family 2 | DW263_09505 | Not Available | Negative | 2204662 - 2207220 | 96341.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
