Segatella copri strain AM22-2

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Prevotellaceae

Genus

Segatella

Description

Segatella copri strain AM22-2 is a Gram-negative, anaerobic bacterium characterized by its rod shape. This strain is found in the gut of Homo sapiens, indicating its role in the human microbiome. The presence of a single replicon suggests a streamlined genetic architecture, which may contribute to its adaptability within the host environment. As an anaerobe, Segatella copri strain AM22-2 thrives in low-oxygen conditions typical of the gastrointestinal tract. This habitat is significant, as the gut microbiome is known to play a crucial role in human health, influencing digestion, metabolism, and immune responses. The specific interactions of Segatella copri with its host may shed light on its contributions to these processes, although the precise mechanisms remain to be fully understood. The accession number for this strain is QRIE00000000.1, which serves as a reference for researchers interested in exploring its genetic and functional characteristics further. Overall, Segatella copri strain AM22-2 exemplifies the diversity of microbial life within the human gut and underscores the importance of studying such organisms to better understand their ecological roles and potential impacts on human health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPrevotellaceae
GenusSegatella
SpeciesSegatella copri
Strainstrain AM22-2

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Segatella copri strain AM22-2 AM22-2.Scaf182, whole genome shotgun

Gene Summary

Adenine Count

1047872 bp

Thymine Count

1054399 bp

Guanine Count

860323 bp

Cytosine Count

851245 bp

Genome Length

3814772 bp

Protein-coding Genes

3136 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDW263_05885Not AvailableNegative1334450 - 13346748650.42
duf4296 domain-containing proteinDW263_05890Not AvailableNegative1334691 - 133565034967.7
lipoprotein signal peptidaseDW263_05895Not AvailableNegative1335653 - 133636927273.6
trar/dksa family transcriptional regulatorDW263_05900Not AvailableNegative1336373 - 133675614520.2
isoleucine--trna ligaseDW263_05905Not AvailableNegative1336868 - 1340479136864.0
hypothetical proteinDW263_05910Not AvailableNegative1340702 - 134102411408.5
hypothetical proteinDW263_05920Not AvailableNegative1341734 - 134237224486.5
exonuclease sbccd subunit dDW263_05925Not AvailablePositive1342827 - 134414050154.3
hypothetical proteinDW263_05930Not AvailablePositive1344137 - 1347547128500.0
aspartate 1-decarboxylaseDW263_05935Not AvailableNegative1347799 - 134814312450.1

Displaying genes 1161 – 1170 of 3220 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.