[Ruminococcus] lactaris strain AM25-1LB

Gram-positiveCoccianaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Mediterraneibacter

Description

[Ruminococcus] lactaris strain AM25-1LB is a Gram-positive, coccoid bacterium notable for its potential role in the fermentation of dietary fibers. This strain exhibits a spherical shape, characteristic of cocci, which may influence its metabolic pathways and interactions within microbial communities. As a member of the genus Ruminococcus, this strain is expected to contribute to the degradation of complex carbohydrates, potentially enhancing the fermentation process in various gastrointestinal environments. While specific metabolic capabilities for this strain are not detailed, members of the Ruminococcus genus are generally known for their ability to break down polysaccharides in the mammalian gut, suggesting that strain AM25-1LB may play a role in the digestion of plant materials. The Gram-positive nature of [Ruminococcus] lactaris strain AM25-1LB implies a thicker peptidoglycan layer in its cell wall, which can provide structural advantages and may influence its resilience in diverse environments, including those with varying pH levels and nutrient availability. This strain's coccoid morphology may also facilitate its aggregation and biofilm formation, which are important for survival in complex microbial ecosystems. Understanding the specific roles and interactions of [Ruminococcus] lactaris strain AM25-1LB in fiber fermentation could provide insights into its potential applications in enhancing gut health and optimizing fermentation processes in agricultural settings.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusMediterraneibacter
Species[Ruminococcus] lactaris
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatintestines
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

[Ruminococcus] lactaris strain AM25-1LB

Accession NumberQRHG00000000.1

Gene Summary

Adenine Count

821949 bp

Thymine Count

799739 bp

Guanine Count

615490 bp

Cytosine Count

583154 bp

Genome Length

2820568 bp

Protein-coding Genes

2572 genes

Non-Coding Genes

141 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+361033 - 361058Not Available
Putative sporulation sigma factorDW672_01765Not Available+373700 - 37412816974.7
helix-turn-helix domain-containing proteinDW672_01770Not Available+374132 - 3743869856.05
hypotheticalDW672_01775Not Available-374409 - 3746498679.75
excisionaseDW672_01780Not Available+374760 - 3749637953.58
Putative integraseDW672_01785Not Available+375041 - 37623145986.3
hypothetical proteinDW672_01790Not Available+376432 - 3766719436.12
hypothetical proteinDW672_01795Not Available+376668 - 3768778204.34
hypothetical proteinDW672_01800Not Available+376912 - 3770946925.4
Putative scaffold proteinDW672_01805Not Available+377258 - 37785121883.8

Displaying genes 1 – 10 of 2713 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites