[Ruminococcus] lactaris strain AM25-1LB

Gram-positiveCoccianaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Mediterraneibacter

Description

Ruminococcus lactaris strain AM25-1LB is a gram-positive, anaerobic bacterium that resides in the intestines of its hosts, which include Homo sapiens (humans) and Gallus gallus (domestic chickens). The bacterium exhibits a cocci shape and possesses flagella, which may facilitate its motility within the intestinal environment. Ruminococcus lactaris belongs to a group of microorganisms that can play significant roles in gut health and digestion. Its anaerobic nature indicates that it thrives in oxygen-depleted environments, such as the intestinal tract, where it likely participates in various metabolic processes, including the fermentation of dietary fibers. The strain AM25-1LB has a single replicon, which is characteristic of many bacteria, reflecting its genetic simplicity and potential for efficient replication in its habitat. The accession number for this strain is QRHG00000000.1, providing a reference for further genomic and taxonomic studies. Biologically, Ruminococcus lactaris may contribute to the gut microbiome's overall functionality, impacting host health by aiding in nutrient absorption, modulating immune responses, and maintaining gut barrier integrity. Its presence in both human and chicken intestines underscores its potential ecological significance, as it may play a role in inter-species microbial interactions and the overall dynamics of intestinal ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusMediterraneibacter
Species[Ruminococcus] lactaris
Strainstrain AM25-1LB

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of [Ruminococcus] lactaris strain AM25-1LB
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatintestines
Biotic relationshipNot Available
Host(s)Homo sapiens, Gallus gallus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

[Ruminococcus] lactaris strain AM25-1LB AM25-1LB.Scaf101, whole

Gene Summary

Adenine Count

821949 bp

Thymine Count

799739 bp

Guanine Count

615490 bp

Cytosine Count

583154 bp

Genome Length

2820568 bp

Protein-coding Genes

2572 genes

Non-Coding Genes

141 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatbDW672_08335Not AvailablePositive1595934 - 159736754007.5
hypothetical proteinDW672_08340Not AvailablePositive1597672 - 1603221200959.0
cobalt chelataseDW672_08350Not AvailablePositive1604495 - 160569143455.4
hypothetical proteinDW672_08355Not AvailablePositive1605681 - 160625621001.7
merr family transcriptional regulatorDW672_08360Not AvailableNegative1606487 - 160732632598.7
pyridoxal phosphate-dependent aminotransferaseDW672_08365Not AvailablePositive1607473 - 160865143760.8
iron-containing alcohol dehydrogenaseDW672_08370Not AvailablePositive1608651 - 160972739556.4
yjih family proteinDW672_08375Not AvailablePositive1609793 - 161113649234.1
yitt family proteinDW672_08380Not AvailablePositive1611212 - 161205429850.1
energy-coupling factor transporter atpaseDW672_08385Not AvailablePositive1612189 - 161304031747.6

Displaying genes 1621 – 1630 of 2713 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.