[Ruminococcus] lactaris strain AM25-1LB

Gram-positiveCoccianaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Mediterraneibacter

Description

Ruminococcus lactaris strain AM25-1LB is a gram-positive, anaerobic bacterium that resides in the intestines of its hosts, which include Homo sapiens (humans) and Gallus gallus (domestic chickens). The bacterium exhibits a cocci shape and possesses flagella, which may facilitate its motility within the intestinal environment. Ruminococcus lactaris belongs to a group of microorganisms that can play significant roles in gut health and digestion. Its anaerobic nature indicates that it thrives in oxygen-depleted environments, such as the intestinal tract, where it likely participates in various metabolic processes, including the fermentation of dietary fibers. The strain AM25-1LB has a single replicon, which is characteristic of many bacteria, reflecting its genetic simplicity and potential for efficient replication in its habitat. The accession number for this strain is QRHG00000000.1, providing a reference for further genomic and taxonomic studies. Biologically, Ruminococcus lactaris may contribute to the gut microbiome's overall functionality, impacting host health by aiding in nutrient absorption, modulating immune responses, and maintaining gut barrier integrity. Its presence in both human and chicken intestines underscores its potential ecological significance, as it may play a role in inter-species microbial interactions and the overall dynamics of intestinal ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusMediterraneibacter
Species[Ruminococcus] lactaris
Strainstrain AM25-1LB

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of [Ruminococcus] lactaris strain AM25-1LB
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatintestines
Biotic relationshipNot Available
Host(s)Homo sapiens, Gallus gallus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

[Ruminococcus] lactaris strain AM25-1LB AM25-1LB.Scaf101, whole

Gene Summary

Adenine Count

821949 bp

Thymine Count

799739 bp

Guanine Count

615490 bp

Cytosine Count

583154 bp

Genome Length

2820568 bp

Protein-coding Genes

2572 genes

Non-Coding Genes

141 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sporulation proteinDW672_05535Not AvailableNegative1016328 - 101663011383.8
pyrimidine-nucleoside phosphorylaseDW672_05540Not AvailableNegative1016668 - 101798146745.9
pyridoxamine 5'-phosphate oxidase family proteinDW672_05545Not AvailableNegative1018062 - 101855918846.6
vanz family proteinDW672_05550Not AvailableNegative1018556 - 101904418397.7
23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmhDW672_05555Not AvailableNegative1019060 - 101953918110.1
hypothetical proteinDW672_05560Not AvailableNegative1019552 - 10197316986.28
sodium/glutamate symporterDW672_05565Not AvailableNegative1019754 - 102094142299.4
c4-dicarboxylate abc transporter substrate-binding proteinDW672_05570Not AvailableNegative1020963 - 102192534938.3
aaa family atpaseDW672_05575Not AvailableNegative1021953 - 102400179976.2
nadph-dependent glutamate synthaseDW672_05580Not AvailableNegative1024230 - 102561849678.8

Displaying genes 1111 – 1120 of 2713 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.