Trinickia dinghuensis strain DHOM06

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Trinickia

Description

Trinickia dinghuensis strain DHOM06 is a Gram-negative, rod-shaped bacterium characterized by a single replicon. This strain has been cataloged under the accession number QRGA00000000.1, which provides a reference point for genetic and genomic studies related to its features and classification. The Gram-negative classification indicates that Trinickia dinghuensis strain DHOM06 possesses a thin peptidoglycan layer surrounded by an outer membrane, a characteristic that often influences its interactions with the environment and its susceptibility to various antibiotics. The rod shape is a common morphological trait among bacteria, which can affect the organism's motility and ability to colonize specific niches. The presence of a single replicon suggests a streamlined genetic organization, which may confer advantages in terms of replication efficiency and adaptability in specific ecological contexts. This trait could also imply a potential for stable inheritance of traits, which can be crucial for survival in various environments. In terms of biological and ecological insights, the characteristics of Trinickia dinghuensis strain DHOM06 may provide important information regarding its environmental adaptations and potential roles in microbial communities. Understanding its genetic makeup and physiological traits can shed light on its ecological functions, such as nutrient cycling or interactions with other microorganisms in its habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusTrinickia
SpeciesTrinickia dinghuensis
Strainstrain DHOM06

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Trinickia dinghuensis strain DHOM06 scaffold49, whole genome

Gene Summary

Adenine Count

1368837 bp

Thymine Count

1340388 bp

Guanine Count

2303584 bp

Cytosine Count

2356473 bp

Genome Length

7369954 bp

Protein-coding Genes

6465 genes

Non-Coding Genes

90 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aquaporin zDWV00_19670Not AvailablePositive4318354 - 431910625347.2
threonine ammonia-lyase, biosyntheticDWV00_19675Not AvailablePositive4319354 - 432092556865.8
aldose epimeraseDWV00_19680Not AvailablePositive4321403 - 432231134037.1
lysm peptidoglycan-binding domain-containing proteinDWV00_19685Not AvailablePositive4322498 - 432320524456.3
amp-dependent synthetaseDWV00_19690Not AvailablePositive4323650 - 432527859171.9
cytochrome bDWV00_19695Not AvailableNegative4325355 - 432588519345.6
duf2288 domain-containing proteinDWV00_19700Not AvailablePositive4325955 - 432628412038.3
lysr family transcriptional regulatorDWV00_19705Not AvailableNegative4326587 - 432752534478.1
rnd transporterDWV00_19710Not AvailablePositive4327745 - 432928053219.3
fusc family proteinDWV00_19715Not AvailablePositive4329292 - 433147878243.2

Displaying genes 3831 – 3840 of 6555 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.